Color code |
Stage/Source |
Annotation Level |
Cycle Time |
Browser |
|
Preliminary sequences: HTGS_FULLTOP, HTGS_PREFIN, HTGS_ACTIVEFIN |
GenBank record only |
Weekly |
CytoView |
|
Finished in genic regions: HTGS_IMPROVED |
Primary Annotation: Gene prediction, EST/cDNA/GSS alignments, whole genome alignments, repeat annotation, displayed as tracks in ContigView |
Weekly/Monthly |
ContigView |
|
Finished in genic regions: HTGS_IMPROVED |
Secondary Annotation: Additionally provides links to comparative maps (CMap), Orthologue/Paralogue/Synteny analysis (Compara), and protein sequence characterization (InterPro/GO). |
Quarterly |
|
Sequenced by external groups |
Primary or Secondary Annotation (see above) as processing queues allow. |
Quarterly |